Stem-loop tae-MIR9668

Accession

MI0030392

Description

Triticum aestivum tae-MIR9668 precursor miRNA

Literature search

1 open access papers mention tae-MIR9668
(2 sentences)

Sequence

327955 reads, 2456.0 reads per million, 235 experiments

agauacauccauuccaaugACAAGUAUUUUCGGACGGAGGgaauacaagauucgacuccaugaaguagcuuuaccucuagcaauagaauaaaaaaaacucccucUGUCCGGAAAUACUUGUCggacaaauugauguauc
.((((((((.(((....(((((((((((((((((((((((((.......((((........((.(((....))).))........)))).........)))))))))))))))))))))))))....))).))))))))

Structure

a        c   ccaa                         --auacaag    gacuccau  a   g 
 gauacauc auu    ugACAAGUAUUUUCGGACGGAGGga         auuc        ga gua c
 |||||||| |||    |||||||||||||||||||||||||         ||||        || |||  
 cuauguag uaa    gCUGUUCAUAAAGGCCUGUcucccu         uaag        cu cau u
-        u   acag                         caaaaaaaa    auaacgau  c   u 

Annotation confidence Medium

Genome context

Unknown

Mature tae-miR9668-5p

• Accession: MIMAT0035782
• Description: Triticum aestivum tae-miR9668-5p mature miRNA
• Sequence: 20 - ACAAGUAUUUUCGGACGGAGG - 40
• Evidence: experimental ; Illumina [1]

Mature tae-miR9668-3p

• Accession: MIMAT0056524
• Description: Triticum aestivum tae-miR9668-3p mature miRNA
• Sequence: 105 - UGUCCGGAAAUACUUGUC - 122
• Evidence: experimental ; unknown

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289