Stem-loop tae-MIR9665

Accession

MI0030386

Description

Triticum aestivum tae-MIR9665 precursor miRNA

Literature search

1 open access papers mention tae-MIR9665
(1 sentences)

Sequence

3291 reads, 500.0 reads per million, 103 experiments

uaauaauuugGUUUGACUUUGCACUGCUAGCGGuggcacugccgcacugcccggucaguguaagcucauuacacuguccgggcagugcggccgugcacUGCUAGCAGUGUAAACUCAAAUCAUaucauuac
((((.((.((((((((.((((((((((((((((((.(((.((((((((((((((.((((((((.....)))))))).)))))))))))))).))))))))))))))))))))).)))))))).)).)))).

Structure

-    a  u        C                  g   u              u        g 
 uaau au ugGUUUGA UUUGCACUGCUAGCGGug cac gccgcacugcccgg caguguaa c
 |||| || |||||||| |||||||||||||||||| ||| |||||||||||||| |||||||| u
 auua ua ACUAAACU AAAUGUGACGAUCGUcac gug cggcgugacgggcc gucacauu c
c    c  U        C                  -   c              u        a 

Annotation confidence High

Genome context

Unknown

Mature tae-miR9665-5p

• Accession: MIMAT0056521
• Description: Triticum aestivum tae-miR9665-5p mature miRNA
• Sequence: 11 - GUUUGACUUUGCACUGCUAGCGG - 33
• Evidence: experimental ; unknown

Mature tae-miR9665-3p

• Accession: MIMAT0035776
• Description: Triticum aestivum tae-miR9665-3p mature miRNA
• Sequence: 99 - UGCUAGCAGUGUAAACUCAAAUCAU - 123
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289