Stem-loop tae-MIR9663

Accession

MI0030383

Description

Triticum aestivum tae-MIR9663 precursor miRNA

Literature search

1 open access papers mention tae-MIR9663
(1 sentences)

Sequence

411631 reads, 4453.0 reads per million, 227 experiments

aagagaagcuuggucaucuaAAGCGUAGUCGAACGAAUCUGccguugaugaggauauguucagauucguucuauuacacuuuaCAUGAGCAGACUACUCACC
..(((.((.(((.((((.(((((.(((((.(((((((((((((........)).......))))))))))).))))).))))).)))).))).)).)))...

Structure

-aa   a  c   g    c     C     C           -------  guu 
   gag ag uug ucau uaAAG GUAGU GAACGAAUCUG       cc   g
   ||| || ||| |||| ||||| ||||| |||||||||||       ||    
   CUC UC GAC AGUA auuuc cauua cuugcuuagac       gg   a
CCA   A  A   G    C     a     u           uuguaua  agu 

Annotation confidence Low

Genome context

6B: 12097776-12097877 [+]

Mature tae-miR9663-5p

• Accession: MIMAT0035773
• Description: Triticum aestivum tae-miR9663-5p mature miRNA
• Sequence: 21 - AAGCGUAGUCGAACGAAUCUG - 41
• Evidence: experimental ; Illumina [1]

Mature tae-miR9663-3p

• Accession: MIMAT0056519
• Description: Triticum aestivum tae-miR9663-3p mature miRNA
• Sequence: 84 - CAUGAGCAGACUACUCACC - 102
• Evidence: experimental ; unknown

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289