Stem-loop tae-MIR9658

Accession

MI0030376

Description

Triticum aestivum tae-MIR9658 precursor miRNA

Literature search

1 open access papers mention tae-MIR9658
(2 sentences)

Sequence

26315 reads, 1547.0 reads per million, 231 experiments

ucugguaacaauagauugggauucaggcgcaguucuuuugaCCGAUUCUCCCAGAAUUUUGAgaaucgcaccuccuaaaccaauagguuuaagauugugagaacggucugauucucAUCGUUCUGGGUGAAUAGGCCaaaaaaccag
.(((((.......(((((.(.......).))))).(((((.((.((((.((((((((..((((((((........((((((....))))))(((((((....)))))))))))))))..)))))))).)))).)).))))).)))))

Structure

u     aacaauagauugggauucaggcgcaguuc     a  G    U        UU        gcaccuccuaaaccaauagguuua       g 
 cuggu                             uuuug CC AUUC CCCAGAAU  UGAgaauc                        agauugu a
 |||||                             ||||| || |||| ||||||||  ||||||||                        |||||||  
 gacca                             aaaaC GG UAAG GGGUCUUG  Acucuuag                        ucuggca g
-     ----------------------------a     C  A    U        CU        ------------------------       a 

Annotation confidence Medium

Genome context

Unknown

Mature tae-miR9658-5p

• Accession: MIMAT0056512
• Description: Triticum aestivum tae-miR9658-5p mature miRNA
• Sequence: 42 - CCGAUUCUCCCAGAAUUUUGA - 62
• Evidence: experimental ; unknown

Mature tae-miR9658-3p

• Accession: MIMAT0035766
• Description: Triticum aestivum tae-miR9658-3p mature miRNA
• Sequence: 117 - AUCGUUCUGGGUGAAUAGGCC - 137
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289