Stem-loop tae-MIR9657a

Accession

MI0030375

Description

Triticum aestivum tae-MIR9657a precursor miRNA

Literature search

2 open access papers mention tae-MIR9657a
(3 sentences)

Sequence

44318 reads, 1898.0 reads per million, 225 experiments

gcgugccggcuccgUUCGCCGGAGAAGCUUACUGCggaccaacgccgUGUGCUUCCUCGUCGAACGGUggcgaccacg
.((((.((.(.(((((((.(((.(((((.(((.(((......))).))).))))).))).))))))).).))..))))

Structure

g    -c  g u       C   A     U   U   ga 
 cgug  cg c ccgUUCG CGG GAAGC UAC GCg  c
 ||||  || | ||||||| ||| ||||| ||| |||   
 gcac  gc g GGCAAGC GCU CUUCG GUg cgc  c
-    ca  g U       U   C     U   c   aa 

Annotation confidence High

Genome context

3B: 720238412-720238489 [-]

Mature tae-miR9657a-5p

• Accession: MIMAT0056511
• Description: Triticum aestivum tae-miR9657a-5p mature miRNA
• Sequence: 15 - UUCGCCGGAGAAGCUUACUGC - 35
• Evidence: experimental ; unknown

Mature tae-miR9657a-3p

• Accession: MIMAT0035765
• Description: Triticum aestivum tae-miR9657a-3p mature miRNA
• Sequence: 48 - UGUGCUUCCUCGUCGAACGGU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289