Stem-loop tae-MIR5384

Accession

MI0030407

Description

Triticum aestivum tae-MIR5384 precursor miRNA

Literature search

1 open access papers mention tae-MIR5384
(1 sentences)

Sequence

92860 reads, 3937.0 reads per million, 232 experiments

ugccgaccccUUCGCCGGUCGCGCGUUCCCCUUGcGGUGAGCGCGCCGCCGUCGAauggaucggug
.(((((.((.((((.((((.((((((((.((....)).)))))))).)))).)))).)).))))).

Structure

u     c  c    C    C        C  U 
 gccga cc UUCG CGGU GCGCGUUC CC U
 ||||| || |||| |||| |||||||| ||  
 uggcu gg aAGC GCCG CGCGCGAG GG G
g     a  u    U    C        U  c 

Annotation confidence Medium

Genome context

1A: 15633879-15633944 [-]

Mature tae-miR5384-5p

• Accession: MIMAT0061490
• Description: Triticum aestivum tae-miR5384-5p mature miRNA
• Sequence: 11 - UUCGCCGGUCGCGCGUUCCCCUUG - 34
• Evidence: experimental ; unknown

Mature tae-miR5384-3p

• Accession: MIMAT0035797
• Description: Triticum aestivum tae-miR5384-3p mature miRNA
• Sequence: 36 - GGUGAGCGCGCCGCCGUCGA - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289