Stem-loop zma-MIR156g

Accession

MI0001458

Description

Zea mays zma-MIR156g precursor miRNA

Literature search

51 open access papers mention zma-MIR156g
(363 sentences)

Sequence

126706 reads, 130978 reads per million, 5 experiments

ggcUGACAGAAGAGAGUGAGCACgcaucggccagacugcaucuauauacggcugcuccuggcgaauggauagaugccaaggcgcagcugcuguugcguGCUCACUUCUCUUUCUGUCAGCu
((((((((((((((((((((((((((.((((..................((((((.((((((............))).))).)))))))))).))))))))))).)))).)))))))))))

Structure

           -    -           u    cagacugcaucuauauac      u   -   gaaug 
ggcUGACAGAA GAGA GUGAGCACgca cggc                  ggcugc ccu ggc     g
||||||||||| |||| ||||||||||| ||||                  |||||| ||| |||      
uCGACUGUCUU CUCU CACUCGugcgu gucg                  ucgacg gga ccg     a
           U    U           u    ------------------      c   a   uagau 

Annotation confidence High

Genome context

chr7: 119411284-119411404 [+]

Mature zma-miR156g-5p

• Accession: MIMAT0001353
• Description: Zea mays zma-miR156g-5p mature miRNA
• Sequence: 4 - UGACAGAAGAGAGUGAGCAC - 23
• Evidence: experimental ; Illumina [2]

Mature zma-miR156g-3p

• Accession: MIMAT0015126
• Description: Zea mays zma-miR156g-3p mature miRNA
• Sequence: 99 - GCUCACUUCUCUUUCUGUCAGC - 120
• Evidence: experimental ; Illumina [2]

References

1. Identifying microRNAs in plant genomes
   "Maher C, Timmermans M, Stein L, Ware D"
   "Proc IEEE CSB (2004) None:718-723


2. PubMed ID: 19936050
   A genome-wide characterization of microRNA genes in maize
   Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
   PLoS Genet (2009) 5:e1000716