Stem-loop tae-MIR9679

Accession

MI0030418

Description

Triticum aestivum tae-MIR9679 precursor miRNA

Literature search

2 open access papers mention tae-MIR9679
(9 sentences)

Sequence

21305 reads, 822.0 reads per million, 230 experiments

gaggcgccucCAGAACCAGAAUGAGUAGCUCaugcaccuacucaacauagugaaugugagcugcucauUCUGGUUUUAGAUGCGCUUCC
(((((((.((.((((((((((((((((((((((.(((............)))...)))))))))))))))))))))).)).))))))).

Structure

-       c  C                      --g   cuacu 
 gaggcgc uc AGAACCAGAAUGAGUAGCUCau   cac     c
 ||||||| || ||||||||||||||||||||||   |||      
 CUUCGCG AG UUUUGGUCUuacucgucgagug   gug     a
C       U  A                      uaa   auaca 

Annotation confidence Low

Genome context

2D: 26660550-26660638 [-]

Mature tae-miR9679-5p

• Accession: MIMAT0035808
• Description: Triticum aestivum tae-miR9679-5p mature miRNA
• Sequence: 11 - CAGAACCAGAAUGAGUAGCUC - 31
• Evidence: experimental ; Illumina [1]

Mature tae-miR9679-3p

• Accession: MIMAT0056542
• Description: Triticum aestivum tae-miR9679-3p mature miRNA
• Sequence: 69 - UCUGGUUUUAGAUGCGCUUCC - 89
• Evidence: experimental ; unknown

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289