Stem-loop hvu-MIR397a

Accession

MI0016465

Description

Hordeum vulgare hvu-MIR397a precursor miRNA

Literature search

4 open access papers mention hvu-MIR397a
(8 sentences)

Sequence

cgcagaggugCCGUUGAGUGCAGCGUUGAUGaaccguccggccauggcccguccgccuccaccgaggccggagcgguucaccggcgcugcacgcaaugacgccucugcuuucu
.(((((((((.(((((.(((((((((((.((((((((((((((.(((..............))).))))))).))))))).))))))))))).))))).))))))))).....

Structure

----c         C     A           A       -       a   cccguc 
     gcagaggug CGUUG GUGCAGCGUUG UGaaccg uccggcc ugg      c
     ||||||||| ||||| ||||||||||| ||||||| ||||||| |||       
     cgucuccgc guaac cacgucgcggc acuuggc aggccgg gcc      g
ucuuu         a     g           c       g       a   accucc 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR397a

• Accession: MIMAT0018224
• Description: Hordeum vulgare hvu-miR397a mature miRNA
• Sequence: 11 - CCGUUGAGUGCAGCGUUGAUG - 31
• Evidence: not_experimental

References

1. PubMed ID: 18521122
   Data mining for miRNAs and their targets in the Triticeae
   "Dryanova A, Zakharov A, Gulick PJ"
   "Genome (2008) 51:433-443