Stem-loop tae-MIR9662a

Accession

MI0030382

Description

Triticum aestivum tae-MIR9662a precursor miRNA

Literature search

2 open access papers mention tae-MIR9662a
(2 sentences)

Sequence

5360455 reads, 38029.0 reads per million, 235 experiments

ggggagcccgGCGGCUCUCUGGUGUUCAAGCAGgaaccucaugcuaccggcagcaugcggcgcuugcUUGAACAUCCCAGAGCCACCGgcgugccaa
((.(.(((.((.((((((..((((((((((((((..((.((((((......)))))).))..))))))))))))))..)))))).))))).).))..

Structure

--  g a   c  C      CU              aa  u      ac 
  gg g gcc gG GGCUCU  GGUGUUCAAGCAGg  cc caugcu  c
  || | ||| || ||||||  ||||||||||||||  || ||||||   
  cc u cgG CC CCGAGA  CUACAAGUUcguuc  gg guacga  g
aa  g g   -  A      CC              gc  c      cg 

Annotation confidence High

Genome context

6A: 54567486-54567582 [+]

Mature tae-miR9662a-5p

• Accession: MIMAT0056518
• Description: Triticum aestivum tae-miR9662a-5p mature miRNA
• Sequence: 11 - GCGGCUCUCUGGUGUUCAAGCAG - 33
• Evidence: experimental ; unknown

Mature tae-miR9662a-3p

• Accession: MIMAT0035772
• Description: Triticum aestivum tae-miR9662a-3p mature miRNA
• Sequence: 68 - UUGAACAUCCCAGAGCCACCG - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289