Stem-loop tae-MIR9652

Accession

MI0030369

Description

Triticum aestivum tae-MIR9652 precursor miRNA

Literature search

1 open access papers mention tae-MIR9652
(6 sentences)

Sequence

73316 reads, 413 reads per million, 116 experiments

cuauugagauguguuugucaCCUGUUUGUCAUUAAGUUUCUUagugccuuugccaucuuagugaagggucaaaagguacuuagAAGCUUAAUGAGAACAUGUGacaaacguacuucgaggcgga
...(((((.((((((((((((.(((((.(((((((((((((.((((((((((((.((.....))..)))..))))))))).)))))))))))))))))).)))))))))))).)))))......

Structure

---cua     a            C     G             U         --   -a  u 
      uugag uguguuugucaC UGUUU UCAUUAAGUUUCU agugccuuu  gcc  uc u
      ||||| |||||||||||| ||||| ||||||||||||| |||||||||  |||  || a
      agcuu augcaaacaGUG ACAAG AGUAAUUCGAAga ucauggaaa  ugg  ag g
aggcgg     c            U     -             u         ac   ga  u 

Annotation confidence High

Genome context

2D: 143094648-143094771 [-]

Mature tae-miR9652-5p

• Accession: MIMAT0035758
• Description: Triticum aestivum tae-miR9652-5p mature miRNA
• Sequence: 21 - CCUGUUUGUCAUUAAGUUUCUU - 42
• Evidence: experimental ; Illumina [1]

Mature tae-miR9652-3p

• Accession: MIMAT0035759
• Description: Triticum aestivum tae-miR9652-3p mature miRNA
• Sequence: 84 - AAGCUUAAUGAGAACAUGUG - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289