Stem-loop hvu-MIR166a

Accession

MI0016455

Description

Hordeum vulgare hvu-MIR166a precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

8 open access papers mention hvu-MIR166a
(44 sentences)

Sequence

caugguugucgaggggaaugacnccggguccnaaagagagacncucgcauggcgugcgcguggugcguuUCGGACCAGGCUUCAUUCCCCaugacuccau
.((((..((((.(((((((((..((.(((((......(((((....((((.(((....))).)))))))))))))).))..))))))))).)))).))))

Structure

c    uu    a         cn  g     naaaga     ncuc    g   u 
 augg  gucg ggggaauga  cc ggucc      gagac    gcau gcg g
 ||||  |||| |||||||||  || |||||      |||||    |||| |||  
 uacc  cagu CCCCUUACU  GG CCAGG      CUuug    cgug ugc c
-    -u    a         UC  A     ------     ----    g   g 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR166a

• Accession: MIMAT0018213
• Description: Hordeum vulgare hvu-miR166a mature miRNA
• Sequence: 70 - UCGGACCAGGCUUCAUUCCCC - 90
• Evidence: not_experimental

References

1. PubMed ID: 18521122
   Data mining for miRNAs and their targets in the Triticeae
   "Dryanova A, Zakharov A, Gulick PJ"
   "Genome (2008) 51:433-443


2. PubMed ID: 23324356
   Developmentally regulated expression and complex processing of barley pri-microRNAs
   Kruszka K, Pacak A, Swida-Barteczka A, Stefaniak AK, Kaja E, Sierocka I, Karlowski W, Jarmolowski A, Szweykowska-Kulinska Z
   BMC Genomics (2013) 14:34