Stem-loop tae-MIR9654a

Accession

MI0030371

Description

Triticum aestivum tae-MIR9654a precursor miRNA

Literature search

2 open access papers mention tae-MIR9654a
(15 sentences)

Sequence

1762 reads, 58.0 reads per million, 198 experiments

ugcacguugguucgcuucaagccuuguggaAUAGGGUAGACUGCAUGGAGCUaugugcagugcaguuuacacuaUUCUGAAAGGCUUGAAGCgaauuaacuagcau
(((..((((((((((((((((((((..(((((((.(((((((((((...((.....)).))))))))))).)))))))..))))))))))))))))))))..))).

Structure

-   ac                    gu       G           GGA  U 
 ugc  guugguucgcuucaagccuu  ggaAUAG GUAGACUGCAU   GC a
 |||  ||||||||||||||||||||  ||||||| |||||||||||   || u
 acg  caauuaagCGAAGUUCGGAA  UCUUauc cauuugacgug   cg g
u   au                    AG       a           --a  u 

Annotation confidence Low

Genome context

3B: 773196382-773196487 [-]

Mature tae-miR9654a-5p

• Accession: MIMAT0056508
• Description: Triticum aestivum tae-miR9654a-5p mature miRNA
• Sequence: 31 - AUAGGGUAGACUGCAUGGAGCU - 52
• Evidence: experimental ; unknown

Mature tae-miR9654a-3p

• Accession: MIMAT0035761
• Description: Triticum aestivum tae-miR9654a-3p mature miRNA
• Sequence: 75 - UUCUGAAAGGCUUGAAGC - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289