Stem-loop tae-MIR397

Accession

MI0030405

Description

Triticum aestivum tae-MIR397 precursor miRNA

Literature search

18 open access papers mention tae-MIR397
(50 sentences)

Sequence

166220 reads, 2803.0 reads per million, 229 experiments

cgcaaaggugccaUUGAGUGCAGCGUUGAUGAACcguccuacuccuccgaggccggagcgguucaccggcgcugcacacaaugacggcucugc
.(((.((.((.(((((.(((((((((((.((((((((((..(((....)))...))).))))))).))))))))))).))))).)).)).)))

Structure

c   a  g  c     A           A       -   -ua   c 
 gca ag ug caUUG GUGCAGCGUUG UGAACcg ucc   cuc u
 ||| || || ||||| ||||||||||| ||||||| |||   |||  
 cgu uc gc guaac cacgucgcggc acuuggc agg   gag c
-   c  g  a     a           c       g   ccg   c 

Annotation confidence Not enough data

Genome context

6A: 120354266-120354358 [-]

Mature tae-miR397-5p

• Accession: MIMAT0035795
• Description: Triticum aestivum tae-miR397-5p mature miRNA
• Sequence: 14 - UUGAGUGCAGCGUUGAUGAAC - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289