Stem-loop tae-MIR9676

Accession

MI0030412

Description

Triticum aestivum tae-MIR9676 precursor miRNA

Sequence

612900 reads, 7188.0 reads per million, 232 experiments

cuucacaccgUGGAUGUCAUCGUGGCCGUACAugaaucgucccccacauccagcucuguucaauuucaggcaaaguggacguuucauugUACGGCCUGAUGACAUCCACggcguggcu
..((((.(((((((((((((((.(((((((((((((.(((((...((.....((.(((........)))))...))))))).)))).)))))))))))))))))))))))).))))..

Structure

cu    a               U         -    u     ccc  aucca  u   uuc 
  ucac ccgUGGAUGUCAUCG GGCCGUACA ugaa cgucc   ac     gc cug   a
  |||| ||||||||||||||| ||||||||| |||| |||||   ||     || |||    
  ggug ggCACCUACAGUAGU CCGGCAUgu acuu gcagg   ug     cg gac   a
uc    c               -         u    u     ---  --aaa  -   uuu 

Annotation confidence High

Genome context

3B: 200808878-200808995 [+]

Mature tae-miR9676-5p

• Accession: MIMAT0035802
• Description: Triticum aestivum tae-miR9676-5p mature miRNA
• Sequence: 11 - UGGAUGUCAUCGUGGCCGUACA - 32
• Evidence: experimental ; Illumina [1]

Mature tae-miR9676-3p

• Accession: MIMAT0056539
• Description: Triticum aestivum tae-miR9676-3p mature miRNA
• Sequence: 90 - UACGGCCUGAUGACAUCCAC - 109
• Evidence: experimental ; unknown

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289