Stem-loop tae-MIR9675

Accession

MI0030408

Description

Triticum aestivum tae-MIR9675 precursor miRNA

Literature search

2 open access papers mention tae-MIR9675
(5 sentences)

Sequence

14400 reads, 96 reads per million, 116 experiments

augcugccagccaagacgagggugaucauaaacuccuggguaaucauguuggacacccaguccaggaacaugccgaggaguucagagcggagagguucaagggagcuugcauggacuuucaugguguauucuucggguacacgccgcagaccaaaggauggcauguaccugaagcaggaguuuaugauggcccagcagUUUAUGAUCACUCUCGUUUUGccugucauca
.((.((.(((.(((((((((((((((((((((((.((((((.((((((.(((((.....)))))((((.((((((.((((((((..(((....(((((....)))))))).))))).))).)))))).))))(((((((((.(((((.........).)))).)))))))))(((....))))))))).)))))).))))))))))))))))))))))).))).)).))

Structure

a  c  c   c                       c      a      ----------------------------------uuggacacccagucca    c      a   -     ga   gaga     a 
 ug ug cag caagacgagggugaucauaaacu cugggu aucaug                                                  ggaa augccg gga guuca  gcg    gguuc a
 || || ||| ||||||||||||||||||||||| |||||| ||||||                                                  |||| |||||| ||| |||||  |||    |||||  
 ac ac guc GUUUUGCUCUCACUAGUAUUUga gacccg uaguau                                                  ucuu uguggu cuu caggu  cgu    ucgag g
-  u  u   c                       c      g      uugaggacgaaguccauguacgguaggaaaccagacgccgcacaugggcu    a      a   u     -a   ----     g 

Annotation confidence Not enough data

Genome context

Unknown

Mature tae-miR9675-3p

• Accession: MIMAT0035798
• Description: Triticum aestivum tae-miR9675-3p mature miRNA
• Sequence: 199 - UUUAUGAUCACUCUCGUUUUG - 219
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289