Stem-loop tae-MIR2275

Accession

MI0030387

Description

Triticum aestivum tae-MIR2275 precursor miRNA

Literature search

3 open access papers mention tae-MIR2275
(28 sentences)

Sequence

4548 reads, 3054.0 reads per million, 100 experiments

aauuuuggcagaugaauuugAGUGUUGGAUGGGACCAAAUCUuaccgccggguguggcaagauuugguuuccuccaauaucuuauguucauaugucagacacugaguguuagcuacaacaagugauaguuggauggacaccugggccugucucaagaaccaaaccucgcaagcugaaugugagauuuggauggaaccaaaucuucagcuauaguggcacaagaUUUGGUUUCCUCCAAUAUCUCGUcuucaacugucccugauga
.....(((((.((((((.(((((((((((.(((((((((((((.((((.....)))).))))))))))))).))))))).)))).)))))).)))))(((((...))))).....((.((.(.(((((((((..((((...(((..((......))..)))...((((((.......))))))..(((((.(((((((((((((..((((...))))..))))))))))))).)))))......)))))))))))))).)).)).

Structure

aauuuuggcagaugaauuugAGUGUUGGAUGGGACCAAAUCUuaccgccggguguggcaagauuugguuuccuccaauaucuuauguucauaugucagacacugaguguuagcua  a  a u         au    accugggccugucucaagaaccaaaccucgcaagcugaaugugagauuugga 
                                                                                                                   ca ca g gauaguugg  ggac                                                    u
                                                                                                                   || || | |||||||||  ||||                                                     
                                                                                                                   gu gu c cugucaacu  ucUG                                                    g
------------------------------------------------------------------------------------------------------------------a  a  c -         --    CUCUAUAACCUCCUUUGGUUUagaacacggugauaucgacuucuaaaccaag 

Annotation confidence High

Genome context

Unknown

Mature tae-miR2275-5p

• Accession: MIMAT0056522
• Description: Triticum aestivum tae-miR2275-5p mature miRNA
• Sequence: 21 - AGUGUUGGAUGGGACCAAAUCU - 42
• Evidence: experimental ; unknown

Mature tae-miR2275-3p

• Accession: MIMAT0035777
• Description: Triticum aestivum tae-miR2275-3p mature miRNA
• Sequence: 224 - UUUGGUUUCCUCCAAUAUCUCGU - 246
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289