Stem-loop tae-MIR9664

Accession

MI0030385

Description

Triticum aestivum tae-MIR9664 precursor miRNA

Literature search

1 open access papers mention tae-MIR9664
(1 sentences)

Sequence

3528061 reads, 12455.0 reads per million, 220 experiments

ggucugaugguuaacgaaaccACGGCAUAGAGGCACUGCAAAcauccgagaugagcaaacuaagcuuguccguaguuUGCAGUCCUCGAUGUCGUAGuuuuguuuuuccaucuauugu
.....(((((..((((((((.(((((((.((((.(((((((((...((.(((((((.......)))))))))..))))))))))))).))))))).))))))))...)))))......

Structure

-ggucu     -uu        c       A    C         auc  a       aa 
      gaugg   aacgaaac ACGGCAU GAGG ACUGCAAAc   cg gaugagc  a
      |||||   |||||||| ||||||| |||| |||||||||   || |||||||  c
      cuacc   uuguuuuG UGCUGUA CUCC UGACGUuug   gc cuguucg  u
uguuau     uuu        A       G    -         -au  -       aa 

Annotation confidence High

Genome context

1B: 141665392-141665509 [-]

Mature tae-miR9664-5p

• Accession: MIMAT0056520
• Description: Triticum aestivum tae-miR9664-5p mature miRNA
• Sequence: 22 - ACGGCAUAGAGGCACUGCAAA - 42
• Evidence: experimental ; unknown

Mature tae-miR9664-3p

• Accession: MIMAT0035775
• Description: Triticum aestivum tae-miR9664-3p mature miRNA
• Sequence: 78 - UGCAGUCCUCGAUGUCGUAG - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289