miRBase entry: tae-MIR1120c

Stem-loop tae-MIR1120c


Accession
MI0030409
Description
Triticum aestivum tae-MIR1120c precursor miRNA
Gene family
MIPF0000443; MIR1120

Literature search
13 open access papers mention tae-MIR1120c
(46 sentences)

Sequence

22200 reads, 188 reads per million, 116 experiments
cucugucccaUAAUAUAAGAACGUUUUUGACacuaguguaguguuaaaaacguucuuauauuuugggacagagg
((((((((((.((((((((((((((((((((((((...)))))))))))))))))))))))).)))))))))).

Structure
-          U                        g 
 cucuguccca AAUAUAAGAACGUUUUUGACacua  
 |||||||||| |||||||||||||||||||||||| u
 gagacagggu uuauauucuugcaaaaauugugau  
g          u                        g 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
3D: 73734313-73734386 [+]

Database links

Mature tae-miR1120c-5p

Accession MIMAT0035799
Description Triticum aestivum tae-miR1120c-5p mature miRNA
Sequence 11 - UAAUAUAAGAACGUUUUUGAC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24734873
    Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
    Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
    BMC Genomics (2014) 15:289