Stem-loop chi-mir-194

Accession

MI0030668

Description

Capra hircus chi-mir-194 precursor miRNA

Literature search

1 open access papers mention chi-mir-194
(1 sentences)

Sequence

uucuuaauggcaucaucgauUGUAACAGCAACUCCAUGUGGAcugugcgucaauuuccaguggagaugcuguuacuuuugauggcugccaacucacu
.......((((((((((((..(((((((((.((((((.((((..((......)).)))))))))).)))))))))..))))))).))))).......

Structure

uucuuaa     -       uU         A      G    cu  gc 
       uggca ucaucga  GUAACAGCA CUCCAU UGGA  gu  g
       ||||| |||||||  ||||||||| |||||| ||||  ||   
       accgu gguaguu  cauugucgu gaggug accu  ua  u
ucacuca     c       uu         a      -    -u  ac 

Annotation confidence Low

Genome context

chr16: 23074153-23074249 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-194

Mature chi-miR-194

• Accession: MIMAT0036029
• Description: Capra hircus chi-miR-194 mature miRNA
• Sequence: 21 - UGUAACAGCAACUCCAUGUGGA - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40