Stem-loop chi-mir-429

Accession

MI0030791

Description

Capra hircus chi-mir-429 precursor miRNA

Gene family

MIPF0000019; mir-8

Literature search

2 open access papers mention chi-mir-429
(5 sentences)

Sequence

agccugccgaugggcgucuuaccagacacgguuagaucugguccuucugucUAAUACUGUCUGGUAAUGCCGuccauccccggc
.(((.(..((((((((.(((((((((((..(((((((..((....)).)))))))..)))))))))).).))))))))..))))

Structure

a   u cc        u -          cg       cu  u 
 gcc g  gaugggcg c uuaccagaca  guuagau  gg c
 ||| |  |||||||| | ||||||||||  |||||||  ||  
 cgg c  cuaccuGC G AAUGGUCUGU  UAAUcug  cu c
-   - cc        C U          CA       -u  u 

Annotation confidence Not enough data

Genome context

AJPT02077529.1: 34-117 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-429

Mature chi-miR-429

• Accession: MIMAT0036226
• Description: Capra hircus chi-miR-429 mature miRNA
• Sequence: 52 - UAAUACUGUCUGGUAAUGCCG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40