miRBase entry: oha-mir-101a

Stem-loop oha-mir-101a


Accession
MI0031314
Description
Ophiophagus hannah oha-mir-101a precursor miRNA
Gene family
MIPF0000046; mir-101


Sequence

caggcugcccuggcuCAGUUAUCACUGUGCUGAUGCUgucuauacuaaagGUACAGUACUGUGAUAACUGAAggaugguagc
...((((((.....(((((((((((.((((((.((((............)))))))))).))))))))))).....))))))

Structure
cag      cuggc           U      A    gucua 
   gcugcc     uCAGUUAUCAC GUGCUG UGCU     u
   ||||||     ||||||||||| |||||| ||||      
   cgaugg     AGUCAAUAGUG CAUGAC AUGg     a
---      uaggA           U      -    aaauc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
AZIM01000560.1: 292653-292734 [+]

Database links

Mature oha-miR-101a-5p

Accession MIMAT0036650
Description Ophiophagus hannah oha-miR-101a-5p mature miRNA
Sequence 16 - CAGUUAUCACUGUGCUGAUGCU - 37
Evidence not_experimental

Mature oha-miR-101a-3p

Accession MIMAT0036651
Description Ophiophagus hannah oha-miR-101a-3p mature miRNA
Sequence 51 - GUACAGUACUGUGAUAACUGAA - 72
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656