Stem-loop oha-mir-129b-1

Accession

MI0031333

Description

Ophiophagus hannah oha-mir-129b-1 precursor miRNA

Gene family

MIPF0000073; mir-129

Sequence

augacgggucuucucuggguCUUUUUGCGGUCUGGGCUUUCugggucuguccaaccccguaucagaAAGCCCUUACCCCAAAAAGCAUcugggguuguacaauggcaucgcugga
......(..(..(((((((((((((((.(((..(((((((((((((.......))))......)))))))))..))).))))))).))))))))..)..)...(((...)))...

Structure

---------augacg gu uu        -       C   CU         ------    cu 
               g  c  cucugggu CUUUUUG GGU  GGGCUUUCu      gggu  g
               |  |  |||||||| ||||||| |||  |||||||||      ||||  u
               c  g  ggggucUA GAAAAAC CCA  CCCGAAaga      ccca  c
aggucgcuacgguaa au uu        C       C   UU         cuaugc    ac 

Annotation confidence Not enough data

Genome context

AZIM01003634.1: 10306-10420 [+]

Mature oha-miR-129b-5p

• Accession: MIMAT0036683
• Description: Ophiophagus hannah oha-miR-129b-5p mature miRNA
• Sequence: 21 - CUUUUUGCGGUCUGGGCUUUC - 41
• Evidence: not_experimental

Mature oha-miR-129b-3p

• Accession: MIMAT0036684
• Description: Ophiophagus hannah oha-miR-129b-3p mature miRNA
• Sequence: 67 - AAGCCCUUACCCCAAAAAGCAU - 88
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656