Stem-loop oha-mir-1397

Accession

MI0031353

Description

Ophiophagus hannah oha-mir-1397 precursor miRNA

Gene family

MIPF0000642; mir-1397

Sequence

acuuucugacaaaaugcgaugugugcauUGCAUUGCGACGGGUUACAUCAcuggucauaacaugAUGUAACCCAACGCAGCAUGAUguaagcaucgugauacauuggagguuuaaaga
((((((.........(((((((.((((((...(((((..(((((((((((.((.......)))))))))))))..)))))...)))))).)))))))........)))))).......

Structure

-------      ugacaaaau       g      GCA     AC           c  gu 
       acuuuc         gcgaugu ugcauU   UUGCG  GGGUUACAUCA ug  c
       ||||||         ||||||| ||||||   |||||  ||||||||||| ||  a
       uggagg         ugcuacg augUAG   GACGC  CCCAAUGUAgu ac  u
agaaauu      -uuacauag       a      UAC     AA           -  aa 

Annotation confidence Not enough data

Genome context

AZIM01001407.1: 8562-8679 [+]

Mature oha-miR-1397-5p

• Accession: MIMAT0036717
• Description: Ophiophagus hannah oha-miR-1397-5p mature miRNA
• Sequence: 29 - UGCAUUGCGACGGGUUACAUCA - 50
• Evidence: not_experimental

Mature oha-miR-1397-3p

• Accession: MIMAT0036718
• Description: Ophiophagus hannah oha-miR-1397-3p mature miRNA
• Sequence: 65 - AUGUAACCCAACGCAGCAUGAU - 86
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656