Stem-loop oha-mir-142

Accession

MI0031355

Description

Ophiophagus hannah oha-mir-142 precursor miRNA

Gene family

MIPF0000084; mir-142

Sequence

uauggacaguggacucaucCAUAAAGUAGAAAGCACUACUAaacgcuuguguccaagUGUAGUGUUUCCUACUUUAUGGAugaguguacugugagcaa
.....((((((.(((((((((((((((((.(((((((((.....(((((....)))))))))))))).))))))))))))))))).))))))......

Structure

-uaugg      g                 A         UAaac     u 
      acagug acucaucCAUAAAGUAG AAGCACUAC     gcuug g
      |||||| ||||||||||||||||| |||||||||     |||||  
      ugucau ugaguAGGUAUUUCAUC UUUGUGAUG     Ugaac u
aacgag      g                 C         -----     c 

Annotation confidence Not enough data

Genome context

AZIM01001308.1: 316277-316374 [-]

Mature oha-miR-142-5p

• Accession: MIMAT0036721
• Description: Ophiophagus hannah oha-miR-142-5p mature miRNA
• Sequence: 20 - CAUAAAGUAGAAAGCACUACUA - 41
• Evidence: not_experimental

Mature oha-miR-142-3p

• Accession: MIMAT0036722
• Description: Ophiophagus hannah oha-miR-142-3p mature miRNA
• Sequence: 58 - UGUAGUGUUUCCUACUUUAUGGA - 80
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656