Stem-loop oha-mir-218-1

Accession

MI0031419

Description

Ophiophagus hannah oha-mir-218-1 precursor miRNA

Gene family

MIPF0000026; mir-218

Sequence

gugggcgagauuuucugUUGUGCUUGAUCUAACCAUGUGguugugagguaugcguuaaacAUGGUUUUGUCAAGCACCAUGgaacgucacgcagcuuucuacagcaug
....(((.(((.((((((.(((((((((..((((((((...(((.......)))....))))))))..))))))))).)))))).))).))).(((......)))...

Structure

------------gugg   a   u      U         CU        -Ggu   ga 
                gcg gau uucugU GUGCUUGAU  AACCAUGU    ugu  g
                ||| ||| |||||| |||||||||  ||||||||    |||  g
                cgc cug aagGUA CACGAACUG  UUGGUAca    gcg  u
guacgacaucuuucga   a   c      C         UU        aauu   ua 

Annotation confidence Not enough data

Genome context

AZIM01000557.1: 744088-744195 [-]

Mature oha-miR-218-5p

• Accession: MIMAT0036836
• Description: Ophiophagus hannah oha-miR-218-5p mature miRNA
• Sequence: 18 - UUGUGCUUGAUCUAACCAUGUG - 39
• Evidence: not_experimental

Mature oha-miR-218-1-3p

• Accession: MIMAT0036837
• Description: Ophiophagus hannah oha-miR-218-1-3p mature miRNA
• Sequence: 61 - AUGGUUUUGUCAAGCACCAUG - 81
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656