Stem-loop oha-mir-222b

Accession

MI0031428

Description

Ophiophagus hannah oha-mir-222b precursor miRNA

Gene family

MIPF0000051; mir-221

Sequence

acaggcUGCUCAGUAGUUGGUGUAGGAucuguuugauaauaccaacAGCUACAUCUGAUUACUGGGUuucu
..(((..((((((((((((((((((...(((((.(......).)))))))))))).))))))))))).)))

Structure

ac   cU           -       GAu     u au 
  agg  GCUCAGUAGUU GGUGUAG   cuguu g  a
  |||  ||||||||||| |||||||   ||||| |   
  ucu  UGGGUCAUUAG CUACAUC   GAcaa c  a
--   -u           U       ---     c au 

Annotation confidence Not enough data

Genome context

AZIM01003920.1: 81717-81787 [+]

Mature oha-miR-222b-5p

• Accession: MIMAT0036850
• Description: Ophiophagus hannah oha-miR-222b-5p mature miRNA
• Sequence: 7 - UGCUCAGUAGUUGGUGUAGGA - 27
• Evidence: not_experimental

Mature oha-miR-222b-3p

• Accession: MIMAT0036851
• Description: Ophiophagus hannah oha-miR-222b-3p mature miRNA
• Sequence: 47 - AGCUACAUCUGAUUACUGGGU - 67
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656