Stem-loop oha-mir-551b

Accession

MI0031480

Description

Ophiophagus hannah oha-mir-551b precursor miRNA

Gene family

MIPF0000360; mir-551

Sequence

uccauuggcuccaGAAAUCAAGGCUGGGUGAGACCUcgugaagaaacuagaaGGCGACCCAUACUUGGUUUCAGgagcuaugaggauauauu
(((..(((((((.(((((((((..(((((..(.(((..((.......))..)))).)))))..))))))))).)))))))...)))......

Structure

------   -au       a         GC     GA A   cg  aa 
      ucc   uggcucc GAAAUCAAG  UGGGU  G CCU  ug  g
      |||   ||||||| |||||||||  |||||  | |||  ||  a
      agg   aucgagG CUUUGGUUC  ACCCA  C GGa  au  a
uuauau   agu       A         AU     -G -   ag  ca 

Annotation confidence Not enough data

Genome context

AZIM01003424.1: 197293-197384 [+]

Mature oha-miR-551b-5p

• Accession: MIMAT0036942
• Description: Ophiophagus hannah oha-miR-551b-5p mature miRNA
• Sequence: 14 - GAAAUCAAGGCUGGGUGAGACCU - 36
• Evidence: not_experimental

Mature oha-miR-551b-3p

• Accession: MIMAT0036943
• Description: Ophiophagus hannah oha-miR-551b-3p mature miRNA
• Sequence: 53 - GGCGACCCAUACUUGGUUUCAG - 74
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656