miRBase entry: oha-mir-98

Stem-loop oha-mir-98

Accession

MI0031494

Description

Ophiophagus hannah oha-mir-98 precursor miRNA

Gene family

MIPF0000002; let-7

Sequence

cuucuugcuccuaccagggUGAGGUAGUAAGUUGUAUUGUUgugggguagggauuugugccccaaaucagagauAACUAUACAACUUACUACUUucccugcgug
...........((((((((.(((((((((((((((((.(((((((((((........))))))).........)))).)))))))))))))))))))))).)))

Structure

cuucuugcucc   -     U                 U    ---------       ggg 
           uac caggg GAGGUAGUAAGUUGUAU GUUg         uggggua   a
           ||| ||||| ||||||||||||||||| ||||         |||||||    
           gug guccc uUUCAUCAUUCAACAUA CAAu         accccgu   u
-----------   c     -                 U    agagacuaa       guu

Annotation confidence Not enough data

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Genome context

AZIM01000045.1: 599246-599349 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-98

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-98-5p

Accession	MIMAT0036962
Description	Ophiophagus hannah oha-miR-98-5p mature miRNA
Sequence	20 - UGAGGUAGUAAGUUGUAUUGUU - 41
Evidence	not_experimental

Mature oha-miR-98-3p

Accession	MIMAT0036963
Description	Ophiophagus hannah oha-miR-98-3p mature miRNA
Sequence	75 - AACUAUACAACUUACUACUU - 94
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656