Stem-loop sequence pal-mir-495

AccessionMI0032539 (change log)
DescriptionPteropus alecto miR-495 stem-loop
Stem-loop
   --     u  -       au     - uug 
5'   gaagu gc ccauguu  uuucg c   a
     ||||| || |||||||  ||||| |   u
3'   cuuca cg gguacaa  aaagc g   a
   uu     -  u       ac     a ugu 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM32557v1; GCA_000325575.1) Overlapping transcripts
KB031153.1: 22078847-22078904 [+]
intergenic
Clustered miRNAs
< 10kb from pal-mir-495
pal-mir-299aKB031153.1: 22069218-22069271 [+]
pal-mir-299bKB031153.1: 22069219-22069265 [-]
pal-mir-380KB031153.1: 22070434-22070490 [+]
pal-mir-323KB031153.1: 22071163-22071218 [+]
pal-mir-758KB031153.1: 22071453-22071510 [+]
pal-mir-329bKB031153.1: 22072221-22072280 [+]
pal-mir-543KB031153.1: 22077011-22077068 [+]
pal-mir-495KB031153.1: 22078847-22078904 [+]
pal-mir-3958KB031153.1: 22080829-22080884 [+]
pal-mir-376cKB031153.1: 22084045-22084102 [+]
pal-mir-376dKB031153.1: 22084388-22084445 [+]
pal-mir-376bKB031153.1: 22084768-22084825 [+]
pal-mir-376aKB031153.1: 22085130-22085185 [+]
pal-mir-1185KB031153.1: 22086787-22086846 [+]
pal-mir-381KB031153.1: 22088438-22088496 [+]
Database links

Mature sequence pal-miR-495-5p

Accession MIMAT0040185
Sequence

1 - 

gaaguugcccauguuauuuucg

 - 22

Get sequence
Evidence experimental; Illumina [1]

Mature sequence pal-miR-495-3p

Accession MIMAT0040186
Sequence

37 - 

aaacaaacauggugcacuucuu

 - 58

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:25128405 "Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing" Cowled C, Stewart CR, Likic VA, Friedlander MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF BMC Genomics. 15:682(2014).