Stem-loop pal-mir-376c

Accession

MI0032563

Description

Pteropus alecto pal-mir-376c precursor miRNA

Literature search

1 open access papers mention pal-mir-376c
(1 sentences)

Sequence

GUGGAUAUUCCUUCUAUGUUUAuguuguuuaugguuaAACAUAGAGGAAAUUCUACAU
(((((..(((((.(((((((((.............))))))))))))))..)))))..

Structure

--     UA     U         uguug 
  GUGGA  UUCCU CUAUGUUUA     u
  |||||  ||||| |||||||||     u
  CAUCU  AAGGA GAUACAAau     u
UA     UA     -         uggua 

Annotation confidence Not enough data

Genome context

KB031153.1: 22084045-22084102 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from pal-mir-376c

Mature pal-miR-376c-5p

• Accession: MIMAT0040230
• Description: Pteropus alecto pal-miR-376c-5p mature miRNA
• Sequence: 1 - GUGGAUAUUCCUUCUAUGUUUA - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-376c-3p

• Accession: MIMAT0040231
• Description: Pteropus alecto pal-miR-376c-3p mature miRNA
• Sequence: 38 - AACAUAGAGGAAAUUCUACAU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682