Stem-loop sequence egr-bantam

AccessionMI0033103 (change log)
DescriptionEchinococcus granulosus bantam stem-loop
Literature search

2 open access papers mention egr-bantam
(5 sentences)

Stem-loop 
   --u   g     u uc     u   g   --   -----     uc 
5'    gaa cggcu u  ucgcg ucu aga  gcg     uuaau  u
      ||| ||||| |  ||||| ||| |||  |||     |||||   
3'    cuu gucga a  agcgc aga ucu  cgc     aauug  u
   uuc   a     c uu     u   g   uc   cauca     au
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM52419v1; GCA_000524195.1) Overlapping transcripts
APAU02000171.1: 120982-121066 [-]
intergenic
APAU02000171.1: 137670-137754 [-]
intergenic
Database links

Mature sequence egr-bantam-5p

Accession MIMAT0041173
Sequence

6 -  

cggcuuuucucgcguucugaga

 - 27

Get sequence
Evidence experimental; Illumina [1-2]

Mature sequence egr-bantam-3p

Accession MIMAT0041174
Sequence

59 -  

ugagaucgcgauuacagcugau

 - 80

Get sequence
Evidence experimental; Illumina [1-2]

References

1
PMID:25168356 "Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus" Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S BMC Genomics. 15:736(2014).
2
PMID:25656283 "microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach" Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC Parasit Vectors. 8:83(2015).