Stem-loop sequence egr-mir-31

AccessionMI0033105 (change log)
DescriptionEchinococcus granulosus miR-31 stem-loop
Literature search

2 open access papers mention egr-mir-31
(3 sentences)

Stem-loop 
   -  ug ug       acu           g  guc 
5'  gc  g  gcaagau   ggcgaagcuga gg   a
    ||  |  |||||||   ||||||||||| ||   a
3'  cg  c  cguucug   cugcuucgacu cu   g
   c  ca gu       -gu           g  aau
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM52419v1; GCA_000524195.1) Overlapping transcripts
APAU02000211.1: 49499-49569 [-]
intergenic
Database links

Mature sequence egr-miR-31-5p

Accession MIMAT0041177
Sequence

6 -  

uggcaagauacuggcgaagcuga

 - 28

Get sequence
Evidence experimental; Illumina [1-2]

Mature sequence egr-miR-31-3p

Accession MIMAT0041178
Sequence

46 -  

agcuucgucuggucuugcugc

 - 66

Get sequence
Evidence experimental; Illumina [1-2]

References

1
PMID:25168356 "Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus" Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S BMC Genomics. 15:736(2014).
2
PMID:25656283 "microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach" Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC Parasit Vectors. 8:83(2015).