Stem-loop sequence egr-mir-2162

AccessionMI0033107 (change log)
DescriptionEchinococcus granulosus miR-2162 stem-loop
Literature search

1 open access papers mention egr-mir-2162
(1 sentences)

Stem-loop 
   ---ggau       uuu        u    c   g 
5'        gagugga   guugcaua uaua auc u
          |||||||   |||||||| |||| |||  
3'        cucacuu   caacguau augu ugg g
   cuacauc       -uu        u    u   g
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM52419v1; GCA_000524195.1) Overlapping transcripts
APAU02000040.1: 661467-661534 [+]
intergenic
Database links

Mature sequence egr-miR-2162-5p

Accession MIMAT0041181
Sequence

6 -  

aguggauuuguugcauauuauac

 - 28

Get sequence
Evidence experimental; Illumina [1-2]

Mature sequence egr-miR-2162-3p

Accession MIMAT0041182
Sequence

42 -  

uauuaugcaacuuuucacucc

 - 62

Get sequence
Evidence experimental; Illumina [1-2]

References

1
PMID:25168356 "Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus" Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S BMC Genomics. 15:736(2014).
2
PMID:25656283 "microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach" Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC Parasit Vectors. 8:83(2015).