miRBase entry: sfr-mir-307

Stem-loop sfr-mir-307


Accession
MI0033593
Description
Spodoptera frugiperda sfr-mir-307 precursor miRNA

Literature search
1 open access papers mention sfr-mir-307
(8 sentences)

Sequence

ucucauucccgguuACUCACUCAACCUGGGUGUGAugugugcacuaguugcucggcccaUCACAACCUCCUUGAGUGAGCgaucguggaggagg
.(((.(((((((((.(((((((((...((.(((((((.(((((.....)))...)).))))))).))...))))))))).))))).))))))).

Structure
u   a    -     A         CCU  G       u  ---   c 
 cuc uucc cgguu CUCACUCAA   GG UGUGAug gu   gca u
 ||| |||| ||||| |||||||||   || ||||||| ||   ||| a
 gag gagg gcuag GAGUGAGUU   CC ACACUac cg   cgu g
g   -    u     C         CCU  A       c  gcu   u 


Annotation confidence Not enough data
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Genome context
JQCY02000225.1: 51944-52037 [+]

Database links

Mature sfr-miR-307-5p

Accession MIMAT0041866
Description Spodoptera frugiperda sfr-miR-307-5p mature miRNA
Sequence 15 - ACUCACUCAACCUGGGUGUGA - 35
Evidence experimental
Illumina [1]

Mature sfr-miR-307-3p

Accession MIMAT0041867
Description Spodoptera frugiperda sfr-miR-307-3p mature miRNA
Sequence 60 - UCACAACCUCCUUGAGUGAGC - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988