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Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21 |
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|---|---|
| PubMed ID | 25693181 |
| Authors | Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK |
| Journal | PLoS One |
| Volume | 10 |
| Pages | e0116988 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| sfr-mir-2c | MI0033539 | None | JQCY02000649.1 | 55067 | 55151 | - | - |
| sfr-mir-210 | MI0033540 | None | JQCY02000420.1 | 65262 | 65321 | + | - |
| sfr-mir-10451 | MI0033541 | None | JQCY02001810.1 | 3400 | 3479 | + | - |
| sfr-mir-10452 | MI0033542 | None | None | None | - | ||
| sfr-mir-10453 | MI0033543 | None | JQCY02012539.1 | 1726 | 1782 | - | - |
| sfr-mir-10454a-1 | MI0033544 | None | JQCY02002261.1 | 44640 | 44731 | + | - |
| sfr-mir-10454a-2 | MI0033545 | None | JQCY02006414.1 | 16915 | 16991 | + | - |
| sfr-mir-10455 | MI0033546 | None | JQCY02001588.1 | 1284 | 1428 | - | - |
| sfr-mir-10456 | MI0033547 | None | JQCY02000394.1 | 108849 | 108913 | + | - |
| sfr-mir-10457 | MI0033548 | None | JQCY02001346.1 | 47133 | 47203 | - | - |
| sfr-mir-10458 | MI0033549 | None | JQCY02003206.1 | 27777 | 27844 | - | - |
| sfr-mir-10459 | MI0033550 | None | JQCY02013522.1 | 3172 | 3228 | - | - |
| sfr-mir-10460 | MI0033551 | None | JQCY02003841.1 | 32552 | 32613 | + | - |
| sfr-mir-10461a | MI0033552 | None | JQCY02003420.1 | 17841 | 17974 | - | - |
| sfr-mir-10454b | MI0033553 | None | JQCY02025556.1 | 253 | 412 | - | - |
| sfr-mir-10454c | MI0033554 | None | JQCY02007576.1 | 23077 | 23184 | + | - |
| sfr-mir-10462-1 | MI0033555 | None | JQCY02004987.1 | 2334 | 2449 | - | - |
| sfr-mir-10462-2 | MI0033556 | None | JQCY02004987.1 | 2335 | 2448 | + | - |
| sfr-mir-10463 | MI0033557 | None | JQCY02003872.1 | 8102 | 8174 | - | - |
| sfr-mir-10464 | MI0033558 | None | JQCY02009733.1 | 14542 | 14664 | + | - |
| sfr-mir-10465-1 | MI0033559 | None | JQCY02033747.1 | 112 | 194 | - | - |
| sfr-mir-10466 | MI0033560 | None | JQCY02003144.1 | 10758 | 10820 | + | - |
| sfr-mir-10467 | MI0033561 | None | JQCY02000399.1 | 116834 | 116909 | + | - |
| sfr-mir-10468 | MI0033562 | None | JQCY02004207.1 | 4897 | 4966 | - | - |
| sfr-mir-10454d | MI0033563 | None | JQCY02000418.1 | 142094 | 142239 | + | - |
| sfr-mir-10454e | MI0033564 | None | JQCY02000167.1 | 42799 | 42914 | + | - |
| sfr-mir-10454f | MI0033565 | None | JQCY02007323.1 | 1121 | 1273 | + | - |
| sfr-mir-10469 | MI0033566 | None | JQCY02003082.1 | 15746 | 15847 | - | - |
| sfr-mir-3286 | MI0033567 | None | JQCY02000420.1 | 68751 | 68840 | + | - |
| sfr-mir-277-1 | MI0033568 | None | JQCY02003144.1 | 30110 | 30217 | + | - |
| sfr-mir-279c | MI0033569 | None | JQCY02004261.1 | 8111 | 8173 | - | - |
| sfr-mir-10470 | MI0033570 | None | JQCY02000066.1 | 50365 | 50435 | + | - |
| sfr-mir-10471 | MI0033571 | None | JQCY02003872.1 | 7015 | 7102 | - | - |
| sfr-mir-10472 | MI0033572 | None | JQCY02008688.1 | 2469 | 2566 | + | - |
| sfr-mir-10473 | MI0033573 | None | JQCY02005519.1 | 1812 | 1925 | + | - |
| sfr-mir-10454g | MI0033574 | None | JQCY02003717.1 | 20130 | 20249 | + | - |
| sfr-mir-10474 | MI0033575 | None | JQCY02018200.1 | 845 | 935 | + | - |
| sfr-mir-10475 | MI0033576 | None | JQCY02006961.1 | 1328 | 1427 | - | - |
| sfr-mir-10476 | MI0033577 | None | JQCY02000012.1 | 250443 | 250516 | - | - |
| sfr-mir-10477 | MI0033578 | None | JQCY02000978.1 | 11976 | 12046 | + | - |
| sfr-mir-10465-2 | MI0033579 | None | JQCY02002420.1 | 21 | 79 | + | - |
| sfr-mir-10492c | MI0033580 | None | JQCY02003453.1 | 38455 | 38528 | - | - |
| sfr-mir-10478 | MI0033581 | None | JQCY02013349.1 | 79 | 157 | - | - |
| sfr-mir-10454h | MI0033582 | None | JQCY02001004.1 | 102471 | 102609 | + | - |
| sfr-mir-10461b | MI0033583 | None | JQCY02007868.1 | 7465 | 7639 | - | - |
| sfr-mir-10508b | MI0033584 | None | JQCY02001950.1 | 30232 | 30297 | - | - |
| sfr-mir-10479 | MI0033585 | None | JQCY02007258.1 | 10218 | 10344 | + | - |
| sfr-mir-10480 | MI0033586 | None | JQCY02000950.1 | 44247 | 44331 | + | - |
| sfr-mir-10481 | MI0033587 | None | JQCY02003071.1 | 13786 | 13867 | + | - |
| sfr-mir-10482 | MI0033588 | None | JQCY02014030.1 | 2442 | 2535 | - | - |
| sfr-mir-10483-1 | MI0033589 | None | JQCY02000428.1 | 160 | 252 | - | - |
| sfr-mir-10483-2 | MI0033590 | None | JQCY02001508.1 | 38477 | 38564 | + | - |
| sfr-mir-279a | MI0033591 | None | JQCY02004261.1 | 8339 | 8408 | - | - |
| sfr-mir-92a | MI0033592 | None | JQCY02001369.1 | 219375 | 219456 | - | - |
| sfr-mir-307 | MI0033593 | None | JQCY02000225.1 | 51944 | 52037 | + | - |
| sfr-mir-10484 | MI0033594 | None | JQCY02001384.1 | 11843 | 11944 | + | - |
| sfr-mir-277-2 | MI0033595 | None | None | None | - | ||
| sfr-mir-2a | MI0033596 | None | JQCY02000649.1 | 55599 | 55680 | - | - |
| sfr-mir-10485 | MI0033597 | None | JQCY02006781.1 | 5985 | 6048 | + | - |
| sfr-mir-10486 | MI0033598 | None | JQCY02017374.1 | 731 | 799 | + | - |
| sfr-mir-2b | MI0033599 | None | JQCY02000649.1 | 55212 | 55277 | - | - |
| sfr-mir-34 | MI0033600 | None | JQCY02003144.1 | 38956 | 39039 | + | - |
| sfr-mir-11 | MI0033601 | None | JQCY02011046.1 | 2067 | 2149 | - | - |
| sfr-mir-375 | MI0033602 | None | JQCY02001602.1 | 100323 | 100409 | - | - |
| sfr-mir-317 | MI0033603 | None | JQCY02003144.1 | 10491 | 10566 | + | - |
| sfr-mir-10487 | MI0033604 | None | JQCY02002420.1 | 2128 | 2198 | + | - |
| sfr-mir-10488 | MI0033605 | None | JQCY02010676.1 | 848 | 939 | - | - |
| sfr-mir-316 | MI0033606 | None | JQCY02000816.1 | 146421 | 146510 | - | - |
| sfr-mir-13b | MI0033607 | None | JQCY02000649.1 | 55342 | 55420 | - | - |
| sfr-mir-6094 | MI0033608 | None | JQCY02000802.1 | 44690 | 44769 | - | - |
| sfr-mir-10489 | MI0033609 | None | JQCY02000745.1 | 198283 | 198431 | - | - |
| sfr-mir-281 | MI0033610 | None | JQCY02004080.1 | 4698 | 4760 | + | - |
| sfr-mir-10490 | MI0033611 | None | JQCY02007038.1 | 8652 | 8719 | + | - |
| sfr-mir-2765 | MI0033612 | None | JQCY02003971.1 | 9531 | 9599 | + | - |
| sfr-mir-10491 | MI0033613 | None | JQCY02028945.1 | 339 | 417 | + | - |
| sfr-mir-13a | MI0033614 | None | JQCY02000649.1 | 55432 | 55568 | - | - |
| sfr-mir-2756 | MI0033615 | None | JQCY02007677.1 | 1934 | 2015 | - | - |
| sfr-mir-10492a | MI0033616 | None | JQCY02000939.1 | 48270 | 48324 | + | - |
| sfr-mir-932 | MI0033617 | None | JQCY02000639.1 | 34942 | 35023 | + | - |
| sfr-mir-10493 | MI0033618 | None | JQCY02002339.1 | 25755 | 25860 | - | - |
| sfr-mir-2766 | MI0033619 | None | JQCY02002242.1 | 34666 | 34745 | - | - |
| sfr-mir-10494 | MI0033620 | None | JQCY02003872.1 | 5271 | 5337 | - | - |
| sfr-mir-10495-1 | MI0033621 | None | JQCY02017443.1 | 547 | 613 | - | - |
| sfr-mir-10495-2 | MI0033622 | None | None | None | - | ||
| sfr-mir-10495-3 | MI0033623 | None | JQCY02006190.1 | 30726 | 30791 | - | - |
| sfr-mir-7 | MI0033624 | None | JQCY02002267.1 | 91988 | 92072 | - | - |
| sfr-mir-10496 | MI0033625 | None | JQCY02021112.1 | 302 | 379 | - | - |
| sfr-mir-10497 | MI0033626 | None | JQCY02000410.1 | 14015 | 14102 | + | - |
| sfr-mir-10498 | MI0033627 | None | JQCY02018862.1 | 179 | 254 | - | - |
| sfr-mir-10499a-1 | MI0033628 | None | JQCY02003683.1 | 100830 | 100910 | - | - |
| sfr-mir-10 | MI0033629 | None | JQCY02000152.1 | 272265 | 272346 | + | - |
| sfr-mir-10499a-2 | MI0033630 | None | JQCY02014572.1 | 230 | 310 | - | - |
| sfr-mir-10499a-3 | MI0033631 | None | JQCY02014572.1 | 491 | 573 | - | - |
| sfr-mir-10499a-4 | MI0033632 | None | JQCY02003683.1 | 100030 | 100111 | - | - |
| sfr-mir-10499a-5 | MI0033633 | None | JQCY02003683.1 | 99530 | 99612 | - | - |
| sfr-mir-10500 | MI0033634 | None | JQCY02002980.1 | 16524 | 16593 | + | - |
| sfr-mir-10501 | MI0033635 | None | JQCY02000758.1 | 5032 | 5092 | - | - |
| sfr-mir-274 | MI0033636 | None | JQCY02003807.1 | 21164 | 21249 | - | - |
| sfr-mir-10502 | MI0033637 | None | JQCY02003396.1 | 6810 | 6877 | - | - |
| sfr-mir-10503 | MI0033638 | None | JQCY02005798.1 | 4 | 60 | - | - |
| sfr-mir-10504 | MI0033639 | None | JQCY02005098.1 | 16743 | 16799 | - | - |
| sfr-mir-14 | MI0033640 | None | JQCY02000236.1 | 187565 | 187648 | - | - |
| sfr-mir-10505-1 | MI0033641 | None | JQCY02034919.1 | 2 | 194 | + | - |
| sfr-mir-10505-2 | MI0033642 | None | JQCY02034919.1 | 2 | 194 | - | - |
| sfr-mir-10506 | MI0033643 | None | JQCY02003193.1 | 4033 | 4111 | + | - |
| sfr-mir-10507-1 | MI0033644 | None | JQCY02004025.1 | 12385 | 12453 | + | - |
| sfr-mir-10507-2 | MI0033645 | None | JQCY02000392.1 | 38355 | 38423 | + | - |
| sfr-mir-2755 | MI0033646 | None | JQCY02000437.1 | 69394 | 69478 | + | - |
| sfr-mir-10508a-1 | MI0033647 | None | JQCY02005172.1 | 37 | 108 | + | - |
| sfr-mir-10508a-2 | MI0033648 | None | JQCY02001750.1 | 34486 | 34557 | - | - |
| sfr-mir-10509 | MI0033649 | None | JQCY02016562.1 | 1009 | 1105 | + | - |
| sfr-mir-10492b | MI0033650 | None | JQCY02001899.1 | 43425 | 43490 | - | - |
| sfr-mir-285 | MI0033651 | None | JQCY02001518.1 | 98591 | 98675 | + | - |
| sfr-mir-279b | MI0033652 | None | JQCY02000179.1 | 50062 | 50148 | + | - |
| sfr-mir-10510 | MI0033653 | None | JQCY02033226.1 | 187 | 289 | - | - |
| sfr-mir-10499b-1 | MI0033654 | None | JQCY02003683.1 | 99787 | 99870 | - | - |
| sfr-mir-10499b-2 | MI0033655 | None | JQCY02000362.1 | 14405 | 14489 | + | - |
| sfr-mir-10511 | MI0033656 | None | JQCY02023877.1 | 144 | 213 | - | - |
| sfr-mir-10512 | MI0033657 | None | JQCY02000371.1 | 93249 | 93351 | + | - |
| sfr-mir-10513 | MI0033658 | None | JQCY02005313.1 | 9511 | 9676 | - | - |
| sfr-mir-10514 | MI0033659 | None | JQCY02031487.1 | 56 | 113 | + | - |
| sfr-mir-263b | MI0033660 | None | JQCY02000863.1 | 78555 | 78642 | - | - |
| dme-mir-2a-1 | MI0000117 | 11749 | chr2L | 19569897 | 19569972 | - | High |
| dme-mir-2a-2 | MI0000118 | 16640 | chr2L | 19569490 | 19569561 | - | High |
| dme-mir-2b-1 | MI0000119 | 9716 | chr2L | 8258616 | 8258692 | - | High |
| dme-mir-2b-2 | MI0000120 | 10189 | chr2L | 19570182 | 19570264 | - | High |
| dme-mir-7 | MI0000127 | 4215 | chr2R | 20606067 | 20606154 | + | High |
| dme-mir-9a | MI0000129 | 8876 | chr3L | 19565131 | 19565208 | + | High |
| dme-mir-13a | MI0000133 | 856 | chr3R | 15417542 | 15417616 | - | High |
| dme-mir-13b-1 | MI0000134 | 7335 | chr3R | 15417408 | 15417475 | - | High |
| dme-mir-13b-2 | MI0000135 | 7665 | chrX | 9091230 | 9091299 | + | High |
| dme-mir-184 | MI0000354 | 120037 | chr2R | 13329402 | 13329501 | - | High |
| dme-mir-92a | MI0000357 | 7392 | chr3R | 25646506 | 25646600 | + | High |
| dme-mir-279 | MI0000363 | 14159 | chr3R | 29215585 | 29215684 | + | High |
| dme-mir-281-1 | MI0000366 | 2379 | chr2R | 12170373 | 12170462 | - | High |
| dme-mir-281-2 | MI0000370 | 12674 | chr2R | 12170153 | 12170244 | - | High |
| dme-mir-34 | MI0000371 | 32763 | chr3R | 10100936 | 10101034 | + | High |
| dme-mir-100 | MI0000378 | 245 | chr2L | 18471434 | 18471533 | + | High |
| dme-mir-92b | MI0000379 | 7352 | chr3R | 25651398 | 25651497 | + | High |
| dme-bantam | MI0000387 | 54356 | chr3L | 642208 | 642288 | + | High |
| dme-mir-305 | MI0000412 | 12557 | chr2L | 7425972 | 7426044 | + | High |
| dme-let-7 | MI0000416 | 7587 | chr2L | 18472034 | 18472111 | + | High |
| dme-mir-307a | MI0000418 | 1366 | chr2R | 9621251 | 9621338 | - | High |
| dme-mir-317 | MI0000429 | 10951 | chr3R | 10091126 | 10091217 | + | High |
| dme-mir-2c | MI0000431 | 2932 | chr3R | 15417744 | 15417845 | - | High |
| bmo-let-7 | MI0004968 | 17656 | NW_004582019.1 | 3373685 | 3373788 | - | High |
| bmo-mir-7 | MI0004970 | 719 | NW_004582035.1 | 2817062 | 2817146 | + | - |
| bmo-mir-9a | MI0004972 | 415 | NW_004582229.1 | 9274 | 9363 | - | High |
| bmo-mir-34 | MI0004975 | 267 | NW_004581681.1 | 3813355 | 3813452 | - | High |
| bmo-mir-279a | MI0004982 | 119 | NW_004581691.1 | 11805 | 11889 | + | - |
| bmo-mir-305 | MI0004985 | 191 | NW_004582013.1 | 1926822 | 1926912 | + | High |
| bmo-mir-307 | MI0004986 | 16 | NW_004582026.1 | 4749629 | 4749724 | - | - |
| bmo-mir-71 | MI0005378 | 64 | NW_004582015.1 | 7707526 | 7707644 | - | High |
| dme-mir-932 | MI0005820 | 569 | chr2L | 6902062 | 6902152 | + | High |
| bmo-mir-2a-1 | MI0008338 | 390 | NW_004582015.1 | 7692561 | 7692650 | - | High |
| bmo-mir-2a-2 | MI0008339 | 291 | NW_004582015.1 | 7692153 | 7692232 | - | High |
| bmo-mir-2b | MI0008340 | 72 | NW_004582015.1 | 7692030 | 7692105 | - | High |
| bmo-mir-13a | MI0008341 | 25 | NW_004582015.1 | 7692416 | 7692494 | - | - |
| bmo-mir-13b | MI0008342 | 88 | NW_004582015.1 | 7692288 | 7692367 | - | High |
| bmo-mir-184 | MI0008346 | 303 | NW_004582034.1 | 4769236 | 4769319 | - | - |
| bmo-mir-281 | MI0008348 | 6348 | NW_004582034.1 | 1683515 | 1683591 | + | High |
| bmo-mir-317 | MI0008349 | 1925 | NW_004581681.1 | 3841495 | 3841586 | - | High |
| bmo-bantam | MI0008350 | 2175 | NW_004582023.1 | 2305314 | 2305403 | + | - |
| bmo-mir-92b | MI0009998 | 3 | NW_004581739.1 | 696074 | 696161 | - | - |
| bmo-mir-932 | MI0010003 | 1 | NW_004582012.1 | 7613424 | 7613512 | + | - |
| dme-mir-307b | MI0011577 | 46 | chr2R | 9621234 | 9621353 | + | - |
| bmo-mir-100 | MI0012291 | 16771 | NW_004582019.1 | 3376172 | 3376313 | - | - |
| bmo-mir-279d | MI0012297 | 110 | NW_004582019.1 | 739120 | 739195 | + | - |
| bmo-mir-279b | MI0012298 | 5250 | NW_004581681.1 | 2936576 | 2936652 | + | High |
| bmo-mir-279c | MI0012299 | 11385 | NW_004581681.1 | 2936836 | 2936915 | + | - |
| bmo-mir-2756 | MI0012309 | 3345 | NW_004581715.1 | 1320630 | 1320706 | - | High |
| bmo-mir-2766 | MI0012320 | 14775 | NW_004581756.1 | 163308 | 163380 | - | High |
| bmo-mir-279e | MI0014278 | None | NW_004582009.1 | 6127664 | 6127769 | - | - |
| bmo-mir-92a | MI0015936 | 22 | NW_004581739.1 | 696247 | 696327 | - | - |