Stem-loop sfr-mir-307

Accession

MI0033593

Description

Spodoptera frugiperda sfr-mir-307 precursor miRNA

Literature search

1 open access papers mention sfr-mir-307
(8 sentences)

Sequence

52307 reads, 2872.0 reads per million, 41 experiments

ucucauucccgguuACUCACUCAACCUGGGUGUGAUGUGugcacuaguugcucggcccaUCACAACCUCCUUGAGUGAGCGAUcguggaggagg
.(((.(((((((((.(((((((((...((.(((((((.(((((.....)))...)).))))))).))...))))))))).))))).))))))).

Structure

u   a    -     A         CCU  G       U  ---   c 
 cuc uucc cgguu CUCACUCAA   GG UGUGAUG Gu   gca u
 ||| |||| ||||| |||||||||   || ||||||| ||   ||| a
 gag gagg gcUAG GAGUGAGUU   CC ACACUac cg   cgu g
g   -    u     C         CCU  A       c  gcu   u 

Annotation confidence High

Genome context

JQCY02000225.1: 51944-52037 [+]

Mature sfr-miR-307-5p

• Accession: MIMAT0041866
• Description: Spodoptera frugiperda sfr-miR-307-5p mature miRNA
• Sequence: 15 - ACUCACUCAACCUGGGUGUGAUGUG - 39
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-307-3p

• Accession: MIMAT0041867
• Description: Spodoptera frugiperda sfr-miR-307-3p mature miRNA
• Sequence: 60 - UCACAACCUCCUUGAGUGAGCGAU - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988