Stem-loop sfr-mir-10475

Accession

MI0033576

Description

Spodoptera frugiperda sfr-mir-10475 precursor miRNA

Sequence

546 reads, 32.0 reads per million, 39 experiments

gugugugaauugaAGCGUCUCCGUGUGGUCGGCGAACacugcaacaugcgacaugucgguaccauaCUCCACCACACGGAGAUGACUCUgauucacucac
(((.((((((((.((((((((((((((((.((.(.....(((.(((((...)))))..))).....).)))))))))))))))).)).)))))))).)))

Structure

   u        a  -              C  C AACac   -a     c 
gug gugaauug AG CGUCUCCGUGUGGU GG G     ugc  acaug  
||| |||||||| || |||||||||||||| || |     |||  ||||| g
cac cacuuagU UC GUAGAGGCACACCA CC C     aug  uguac  
   u        C  A              -  U auacc   gc     a 

Annotation confidence High

Genome context

JQCY02006961.1: 1328-1427 [-]

Mature sfr-miR-10475-5p

• Accession: MIMAT0041834
• Description: Spodoptera frugiperda sfr-miR-10475-5p mature miRNA
• Sequence: 14 - AGCGUCUCCGUGUGGUCGGCGAAC - 37
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10475-3p

• Accession: MIMAT0041835
• Description: Spodoptera frugiperda sfr-miR-10475-3p mature miRNA
• Sequence: 67 - CUCCACCACACGGAGAUGACUCU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988