miRBase entry: sfr-mir-10508a-2

Stem-loop sfr-mir-10508a-2


Accession
MI0033648
Description
Spodoptera frugiperda sfr-mir-10508a-2 precursor miRNA


Sequence

780 reads, 80.0 reads per million, 37 experiments
aaacucgagucgucaguagcagcgugaCAAUCGCCGCGUCGUGUGUCGCgaAAUGCUGCUCAUGAAUAUGAg
...((((..((((.(((((((.(((((((..((......))..)))))))...))))))).))))...))))

Structure
aaa    -ag    c       --g       AU  CC 
   cucg   ucgu aguagca   cgugaCA  CG  G
   ||||   |||| |||||||   |||||||  ||   
   gAGU   AGUA UCGUCGU   gCGCUGU  GC  C
---    AUA    C       AAa       GU  UG 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
JQCY02001750.1: 34486-34557 [-]

Database links

Mature sfr-miR-10508a-5p

Accession MIMAT0041958
Description Spodoptera frugiperda sfr-miR-10508a-5p mature miRNA
Sequence 28 - CAAUCGCCGCGUCGUGUGUCGC - 49
Evidence experimental
Illumina [1]

Mature sfr-miR-10508a-2-3p

Accession MIMAT0041960
Description Spodoptera frugiperda sfr-miR-10508a-2-3p mature miRNA
Sequence 52 - AAUGCUGCUCAUGAAUAUGA - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988