Stem-loop sfr-mir-10495-1

Accession

MI0033621

Description

Spodoptera frugiperda sfr-mir-10495-1 precursor miRNA

Sequence

2089 reads, 177.0 reads per million, 39 experiments

gCAUCAACCGGGGAUUGUCCUUuggugcacuucaauagugcauacaggGAUAAUCGCCGGCUGAUGU
((((((.((((.(((((((((...(((((((.....)))))))...))))))))).)))).))))))

Structure

      A    G         Uug       u 
gCAUCA CCGG GAUUGUCCU   gugcacu c
|||||| |||| |||||||||   ||||||| a
UGUAGU GGCC CUAAUAGgg   uacguga a
      C    G         aca       u 

Annotation confidence Medium

Genome context

JQCY02017443.1: 547-613 [-]

Mature sfr-miR-10495-5p

• Accession: MIMAT0041920
• Description: Spodoptera frugiperda sfr-miR-10495-5p mature miRNA
• Sequence: 2 - CAUCAACCGGGGAUUGUCCUU - 22
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10495-3p

• Accession: MIMAT0041921
• Description: Spodoptera frugiperda sfr-miR-10495-3p mature miRNA
• Sequence: 49 - GAUAAUCGCCGGCUGAUGU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988