Stem-loop sfr-mir-10483-2

Accession

MI0033590

Description

Spodoptera frugiperda sfr-mir-10483-2 precursor miRNA

Sequence

53879 reads, 3265.0 reads per million, 42 experiments

aguguguacuuacgucaCCUGUAAUUGUUCGUUCCCUUUuguaaauaauuaaGGGGCCGAACAAUUCCAGACGauguuugaacagacu
(((.(((.(..(((((..(((.(((((((((.((((((............)))))).))))))))).)))..)))))..).))).)))

Structure

   g   a uu     aC   U         U      Uugua 
agu ugu c  acguc  CUG AAUUGUUCG UCCCUU     a
||| ||| |  |||||  ||| ||||||||| ||||||      
uca aca g  uguaG  GAC UUAACAAGC GGGGaa     a
   g   a uu     CA   C         C      uuaau 

Annotation confidence High

Genome context

JQCY02001508.1: 38477-38564 [+]

Mature sfr-miR-10483-5p

• Accession: MIMAT0041859
• Description: Spodoptera frugiperda sfr-miR-10483-5p mature miRNA
• Sequence: 18 - CCUGUAAUUGUUCGUUCCCUUU - 39
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10483-2-3p

• Accession: MIMAT0041861
• Description: Spodoptera frugiperda sfr-miR-10483-2-3p mature miRNA
• Sequence: 53 - GGGGCCGAACAAUUCCAGACG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988