miRBase entry: sfr-mir-10493

Dead hairpin entry

Stem-loop sfr-mir-10493


Accession
MI0033618
Description
Spodoptera frugiperda sfr-mir-10493 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

439 reads, 52.0 reads per million, 41 experiments
cagaauuuuuucugauccgaaGCUGCGGACUGCCUAGCGaguaaccggggcuccgguuugaaaagcaggaguagaAACGGGGUGGUUUUUAGUcagaaagagucug
((((.(((((((((((..((((((((..(((.(((.((....((((((....))))))......)))))))).........))))))))..)))))))))))))))

Structure
    a           cc        -------GG   G   A  --Gagu      g 
caga uuuuuucugau  gaaGCUGC         ACU CCU GC      aaccgg g
|||| |||||||||||  ||||||||         ||| ||| ||      ||||||  
gucu gagaaagacUG  UUUUGGUG         uga gga cg      uuggcc c
    -           AU        GGGCAAaga   -   -  aaaagu      u