Stem-loop sfr-mir-285

Accession

MI0033651

Description

Spodoptera frugiperda sfr-mir-285 precursor miRNA

Sequence

5877 reads, 267.0 reads per million, 30 experiments

guccacaauuugacaACUGUAUUCGAGUGAGUGGAUAGAguugugauucucUAGCACCAUUCGAAUUCAGUGcucgaauuuggac
(((((.(((((((..((((.(((((((((.(((..(((((........))))).)))))))))))).))))..))))))))))))

Structure

     c       ca    U         A   GA     uug 
gucca aauuuga  ACUG AUUCGAGUG GUG  UAGAg   u
||||| |||||||  |||| ||||||||| |||  |||||    
caggu uuaagcu  UGAC UAAGCUUAC CAC  AUcuc   g
     -       cG    U         -   -G     uua 

Annotation confidence High

Genome context

JQCY02001518.1: 98591-98675 [+]

Mature sfr-miR-285-5p

• Accession: MIMAT0041965
• Description: Spodoptera frugiperda sfr-miR-285-5p mature miRNA
• Sequence: 16 - ACUGUAUUCGAGUGAGUGGAUAGA - 39
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-285-3p

• Accession: MIMAT0041966
• Description: Spodoptera frugiperda sfr-miR-285-3p mature miRNA
• Sequence: 52 - UAGCACCAUUCGAAUUCAGUG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988