Stem-loop sfr-mir-10454d

Accession

MI0033563

Description

Spodoptera frugiperda sfr-mir-10454d precursor miRNA

Sequence

7314 reads, 433.0 reads per million, 42 experiments

ugcuauuacaaUUGUGUCAGAAUGGUCGAUCauugagcagugcaagagggacagagcuaugaagguuguauagcuaugaagguuguauagcuucaucccucuugcacugcucagugaucggccaUUCUGACACAAUUGUAAUAGca
(((((((((((((((((((((((((((((((((((((((((((((((((((........(((((.((((((((((.....))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))

Structure

                                                   cagagcua     g          a 
ugcuauuacaaUUGUGUCAGAAUGGUCGAUCauugagcagugcaagaggga        ugaag uuguauagcu u
|||||||||||||||||||||||||||||||||||||||||||||||||||        ||||| |||||||||| g
acGAUAAUGUUAACACAGUCUUaccggcuagugacucgucacguucucccu        acuuc gauauguugg a
                                                   --------     -          a 

Annotation confidence Low

Genome context

JQCY02000418.1: 142094-142239 [+]

Mature sfr-miR-10454d-5p

• Accession: MIMAT0041808
• Description: Spodoptera frugiperda sfr-miR-10454d-5p mature miRNA
• Sequence: 12 - UUGUGUCAGAAUGGUCGAUC - 31
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10454d-3p

• Accession: MIMAT0041809
• Description: Spodoptera frugiperda sfr-miR-10454d-3p mature miRNA
• Sequence: 125 - UUCUGACACAAUUGUAAUAG - 144
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988