Accession
MI0033641
Description
Spodoptera frugiperda
sfr-mir-10505-1 precursor miRNA
Sequence
344550
reads,
12706.0
reads per million, 42 experiments
UGUAGAGCCAAGUUUCUAACccuauacuuuugaacuggcgaguuggccgcacggaaagauacuuuuuaagaaaacggacuuuuugcuauucgucauaugggcuugagcuuaaaaaucuauucaaucuucuaaacucuuuccgugcggccaacucgccgguucaaaaguaUAGGGUUAGAAACUUGGCUCUaca
(((((((((((((((((((((((((((((((((((((((((((((((((((((((((((...(((..((((.((.(((.((((.(((....(((.....)))...)))..)))).))).))...))))..))).)))))))))))))))))))))))))))))))))))))))))))))))))))))))))))
(((((((((((((((((((((((((((((((((((((((((((((((((((((((((((...(((..((((.((.(((.((((.(((....(((.....)))...)))..)))).))).))...))))..))).)))))))))))))))))))))))))))))))))))))))))))))))))))))))))))
Structure
uac uu --a c c -u auuc a
UGUAGAGCCAAGUUUCUAACccuauacuuuugaacuggcgaguuggccgcacggaaaga uuu aaga aa gga uuuu gcu guc u
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || ||| |||| ||| ||| a
acaUCUCGGUUCAAAGAUUGGGAUaugaaaacuuggccgcucaaccggcgugccuuucu aaa uucu uu ucu aaaa cga cgg u
--c uc aac a a uu -guu g
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
JQCY02034919.1: 2-194 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sfr-mir-10505-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sfr-miR-10505-5p
| Accession | MIMAT0041950 |
| Description | Spodoptera frugiperda sfr-miR-10505-5p mature miRNA |
| Sequence | 1 - UGUAGAGCCAAGUUUCUAAC - 20 |
| Evidence |
experimental
Illumina [1] |
Mature sfr-miR-10505-3p
| Accession | MIMAT0041951 |
| Description | Spodoptera frugiperda sfr-miR-10505-3p mature miRNA |
| Sequence | 170 - UAGGGUUAGAAACUUGGCUCU - 190 |
| Evidence |
experimental
Illumina [1] |
References
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