miRBase entry: sfr-mir-10461b

Dead hairpin entry

Stem-loop sfr-mir-10461b


Accession
MI0033583
Description
Spodoptera frugiperda sfr-mir-10461b precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

5164 reads, 452.0 reads per million, 42 experiments
ggcuuacucacgUAACUGUUUGACGAGGAACUcuacuacuuccaagccaugcuaaaggcucauauucaugagcagcauuccgcgacacacgacgcggcgauugucgcuauuacugagccucuagcauggcUUGAAACUAGUCGAGUUCCUcaucaaacaguuacgugaguaagcc
(((((((((((((((((((((((.(((((((((.((((.((.((((((((((((.(((((((........(((.(((..(((((........)))))....))).))).....))))))).)))))))))))).)).)))).))))))))).)))))))))))))))))))))))

Structure
                       C         u    c  c            a       uauucaug   a   --uu     aca 
ggcuuacucacgUAACUGUUUGA GAGGAACUc acua uu caagccaugcua aggcuca        agc gca    ccgcg   c
||||||||||||||||||||||| ||||||||| |||| || |||||||||||| |||||||        ||| |||    |||||    
ccgaaugagugcauugacaaacu cUCCUUGAG UGAU AA GUUcgguacgau uccgagu        ucg ugu    ggcgc   a
                       a         C    C  A            c       ---cauua   c   uagc     agc