Stem-loop sfr-mir-375

Accession

MI0033602

Description

Spodoptera frugiperda sfr-mir-375 precursor miRNA

Literature search

1 open access papers mention sfr-mir-375
(1 sentences)

Sequence

139749 reads, 3124.0 reads per million, 42 experiments

augacagcgagacaACCCGAGCGGAUUGAGCAAACUauuugucuguuagcaagUUUGUUCGCCCCGGCUCGAGUCGUcuggcgucau
(((((.((.((((.((.(((((((..((((((((((...(((......)))))))))))))..)).))))).)).)))).)))))))

Structure

     a  g    a  C     -  AU          auu   cu 
augac gc agac AC CGAGC GG  UGAGCAAACU   ugu  g
||||| || |||| || ||||| ||  ||||||||||   |||   
uacug cg ucUG UG GCUCG CC  GCUUGUUUga   acg  u
     -  g    C  A     G  CC          ---   au 

Annotation confidence High

Genome context

JQCY02001602.1: 100323-100409 [-]

Mature sfr-miR-375-5p

• Accession: MIMAT0041882
• Description: Spodoptera frugiperda sfr-miR-375-5p mature miRNA
• Sequence: 15 - ACCCGAGCGGAUUGAGCAAACU - 36
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-375-3p

• Accession: MIMAT0041883
• Description: Spodoptera frugiperda sfr-miR-375-3p mature miRNA
• Sequence: 54 - UUUGUUCGCCCCGGCUCGAGUCGU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988