Accession
MI0033642
Description
Spodoptera frugiperda
sfr-mir-10505-2 precursor miRNA
Sequence
343422
reads,
12645.0
reads per million, 42 experiments
UGUAGAGCCAAGUUUCUAACccuauacuuuugaaccggcgaguuggccgcacggaaagaguuuagaagauugaauagauuuuuaagcucaagcccauaugacgaauagcaaaaaguccguuuucuuaaaaaguaucuuuccgugcggccaacucgccaguucaaaaguaUAGGGUUAGAAACUUGGCUCUaca
(((((((((((((((((((((((((((((((((((.(((((((((((((((((((((((.(((..((((..((((.(((((((..(((..................))).))))))).))))))))..)))...))))))))))))))))))))))).)))))))))))))))))))))))))))))))))))
(((((((((((((((((((((((((((((((((((.(((((((((((((((((((((((.(((..((((..((((.(((((((..(((..................))).))))))).))))))))..)))...))))))))))))))))))))))).)))))))))))))))))))))))))))))))))))
Structure
c --g ag uu a aa caagccca
UGUAGAGCCAAGUUUCUAACccuauacuuuugaac ggcgaguuggccgcacggaaaga uuu aaga gaau gauuuuu gcu u
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| |||| ||||||| |||
acaUCUCGGUUCAAAGAUUGGGAUaugaaaacuug ccgcucaaccggcgugccuuucu aaa uucu uuug cugaaaa cga a
a aug aa -- c -a uaagcagu
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
JQCY02034919.1: 2-194 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from sfr-mir-10505-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sfr-miR-10505-5p
| Accession | MIMAT0041950 |
| Description | Spodoptera frugiperda sfr-miR-10505-5p mature miRNA |
| Sequence | 1 - UGUAGAGCCAAGUUUCUAAC - 20 |
| Evidence |
experimental
Illumina [1] |
Mature sfr-miR-10505-3p
| Accession | MIMAT0041951 |
| Description | Spodoptera frugiperda sfr-miR-10505-3p mature miRNA |
| Sequence | 170 - UAGGGUUAGAAACUUGGCUCU - 190 |
| Evidence |
experimental
Illumina [1] |
References
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