Stem-loop sfr-mir-10496

Accession

MI0033625

Description

Spodoptera frugiperda sfr-mir-10496 precursor miRNA

Sequence

4326 reads, 230.0 reads per million, 42 experiments

cggcuUAUUCUUGGUCUUCGAUUGAAGGuacuaguaucuugauacuaccuguacccucUUGAUACUGCAGAUUGGCUC
.((((...(((((((..((((..((.(((((((((((....))))))...))))).)))))).)))).)))..)))).

Structure

c    UAU   -    CU    UU  A     ---      c 
 ggcu   UCU UGGU  UCGA  GA GGuac   uaguau u
 ||||   ||| ||||  ||||  || |||||   ||||||  
 UCGG   AGA GUCA  AGUU  cu ccaug   aucaua u
C    -UU   C    -U    --  c     ucc      g 

Annotation confidence Low

Genome context

JQCY02021112.1: 302-379 [-]

Mature sfr-miR-10496-5p

• Accession: MIMAT0041925
• Description: Spodoptera frugiperda sfr-miR-10496-5p mature miRNA
• Sequence: 6 - UAUUCUUGGUCUUCGAUUGAAGG - 28
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10496-3p

• Accession: MIMAT0041926
• Description: Spodoptera frugiperda sfr-miR-10496-3p mature miRNA
• Sequence: 59 - UUGAUACUGCAGAUUGGCUC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988