Stem-loop sfr-mir-10483-1

Accession

MI0033589

Description

Spodoptera frugiperda sfr-mir-10483-1 precursor miRNA

Sequence

47024 reads, 2685.0 reads per million, 42 experiments

ugcaguuugugcuuacgccaCCUGUAAUUGUUCGUUCCCUUUuguaaauaguuaaGGGGCUGAACAAUUCCAGACGauguuugaacagacuca
((.(((((((.(..(((.(..(((.(((((((((.((((((............)))))).))))))))).)))..).)))..).)))))))))

Structure

  c       g uu   c aC   U         U      Uugua 
ug aguuugu c  acg c  CUG AAUUGUUCG UCCCUU     a
|| ||||||| |  ||| |  ||| ||||||||| ||||||      
ac ucagaca g  ugu G  GAC UUAACAAGU GGGGaa     a
  -       a uu   a CA   C         C      uugau 

Annotation confidence High

Genome context

JQCY02000428.1: 160-252 [-]

Mature sfr-miR-10483-5p

• Accession: MIMAT0041859
• Description: Spodoptera frugiperda sfr-miR-10483-5p mature miRNA
• Sequence: 21 - CCUGUAAUUGUUCGUUCCCUUU - 42
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10483-3p

• Accession: MIMAT0041860
• Description: Spodoptera frugiperda sfr-miR-10483-3p mature miRNA
• Sequence: 56 - GGGGCUGAACAAUUCCAGACG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988